We are seeking talented professionals with skills in research data management to support two newly launched Cystic Fibrosis Innovation Hubs: Pulse-CF (University of Manchester) and TrailFinder (University of Liverpool), working under the Computational Biology Facility’s leadership.
The post is initially funded for 4 years on a part-time basis and part of the Research Technical Professional Career Pathway at Liverpool, which provides opportunities for career progression.
Training for this role can be provided, and therefore we also welcome applications from less experienced candidates and those returning to work after a career break.
Computational Biology Facility (CBF)
The CBF is a shared research facility within Liverpool Shared Research Facilities (LIV-SRF). LIV-SRF helps to ensure that staff have access to the world-class equipment and expertise to pursue outstanding science. The CBF aims to develop and support data-driven biological and clinical research by nurturing a team of specialists that work on forming new collaborations and delivering on an array of scientific challenges. We work as scientific partners and as service providers offering tailor-made solutions across a wide range of bioinformatics, statistics, and functional interpretation of data. We have an expanding team of computational biologists and software engineers that work multi-functionally across a wide variety of projects and disciplines, providing a supportive environment for our team to share knowledge and thrive. The CBF supplies a wide range of standard and bespoke services and strategic partnerships to Life Science researchers and clinicians. A snapshot of the CBF portfolio can be consulted https://www.liverpool.ac.uk/media/livacuk/computationalbiologyfacility/FINAL,CBF2024.pdf and the wider website www.liverpool.ac.uk/cbf.
Our activity can be summarised in the following areas:
PULSE-CF
The PULSE-CF Innovation Hub is a multi-centre initiative led by University of Manchester and funded by a new award from CF Trust and LifeArc. The Hub is focussed on understanding the causes of exacerbations of CF and identifying ways to prevent these. Pulmonary exacerbations are a prominent feature of CF, though causes and pathophysiology remain poorly understood. This significantly restricts our ability to predict and prevent one of the most significant and burdensome aspects of CF. We propose that different types of exacerbation (i.e. endotypes) are determined by trigger and/or individual host factors such as airway microbiome composition and immune status. PULSE-CF is a multi-centre, multi-disciplinary collaborative Innovation Hub to deliver new mechanistic understanding of exacerbations and treatment response. This will allow us to establish an evidence-based clinical trial platform to test exacerbation prevention therapies, directly reducing harm from both exacerbations and antibiotics used as treatment.
The CF-TRACKER study will study causes of exacerbations through a UK-wide remote surveillance study, focussing on triggers, including viral infection and airway microbiome/proteome composition, and patient-specific susceptibility factors. A sub-cohort will undertake more intensive sampling to identify underlying mechanisms, including immune response and exposure to environmental pollutants. This two-tiered approach will allow delivery at breadth and depth.
The UNIFIED-CF (jointly run with TRAILFINDER) study will investigate recovery from exacerbation in those receiving IV antibiotics within hospital, to link causes of exacerbations with clinical outcomes and response to therapy. By comprehensively analysing microbial and immune phenotypes in participants, we aim to identify factors associated with clinical and biomarker response to IV antibiotics and potentially inform further clinical trials.
More information can be found https://www.pulse-cf.com/
TRAILFINDER
The CF-Trailfinder Innovation Hub is a multi-centre initiative led by University of Liverpool alongside nine other Institutions and funded by CF Trust and LifeArc and forms part of a larger Network funded through CF Trust and LifeArc and includes Pulse-CF (led by University of Manchester), CF-Precision (led by Imperial College, London) and University of Cambridge.
The Hub will serve people with cystic fibrosis at all life stages by developing new approaches to treating lung infections, managing exacerbations, and maintaining healthy lungs.
The Hub consists of academics and clinicians underpinning two work streams, focussing on 1) Advancing phage therapy for antibiotic-resistant lung infections and 2) Optimising treatment for acute pulmonary exacerbations.
Faculty of Health and Life Sciences
The FHLS is one of three Faculties that make up the University of Liverpool. The Faculty is one of UK’s leading centres for health and life science research and education and is the only Russell Group University to offer scientific and clinical education that spans the full range of biosciences, clinical, medicine, health sciences, dentistry and veterinary sciences. Consequently, we are one of the largest and most innovative educators in our field and provide a unique range of courses across the full spectrum of health and life sciences within a single faculty. The University of Liverpool has been at the forefront of health and life sciences research for over 130 years, and the Faculty continues to deliver its civic responsibility by training healthcare professionals and undertaking research to address both local health inequalities and global health outcomes.
The FHLS has over 2,000 staff, 6,000 undergraduates and 1,000 postgraduate students who, together with many alumni and partners, are helping to deliver research which addresses the most important challenges impacting society today through a 'One Health' approach to our research, recognising the connection between human, animal and environmental health.
Post Overview
Successful applicants will be talented, versatile research data specialists working to a professional standard with up-to-date skills. You should have demonstrable experience in managing and curating complex, large and/or rapidly changing datasets, supplemented by an understanding of open research and the principles of FAIR data and how that is applied within an academic research setting. This experience could have been acquired working in academia, industry or via a PhD degree that required significant application of research data management and/or data engineering techniques. Given the research focus for this post, prior experience of contributing to academic research projects involving omics datasets is also desirable as well as an interest in cystic fibrosis research.
The post is currently advertised at 0.5FTE but if the post-holder desires it, the environment can provide opportunities to complement activity in a variety of avenues. For example, there may be options for the successful candidate to undertake further projects on a casual or fixed term basis, support teaching within the CBF or to pursue a funded PhD part-time, depending on skills and career development goals.
You will sit formally on the CBF team under supervision by CBF co-director Dr Eva Caamano Gutierrez and will be closely aligned and guided scientifically with CF Hub directors Professor Alexander Horsley and Professor Jo Fothergill. The CBF operates in a research environment that encourages working independently and supports knowledge expansion and scientific curiosity. You will be part of a supportive team of data scientists and software developers that allow for teamwork and information sharing opportunities. The team is fully committed to the Researcher Development Concordat and provides ample opportunity for development.
You may also be involved in training groups and individuals in processes you have developed and have experience in.
This post is hybrid but remote work could be facilitated, meanwhile the person is committed to join in-person on campus or, with visits to meet with the coordinating team based at the University Manchester or other collaborators on the project needs and engaging with the wider national community as needed.
The post is funded for up to 4 years in the first instance and is available from March 2025. Informal enquiries may be made to Dr Eva Caamano Gutierrez (caamano@liverpool.ac.uk).
All staff within HLS are encouraged to contribute to wider collegiality initiatives. For example:
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